The Philippine Star

RT-PCR VS RAPID TEST: COMPARING TWO TEST METHODS

- By ARGIE C. AGUJA

Not all test kits to detect COVID-19 are alike and each has its own advantages and disadvanta­ges.

As the worldwide number of infections reach more than five million cases, 1,899,675 recoveries and 328,172 deaths (as of May 21), the World Health Organizati­on (WHO) continues to call for urgent action to test all suspected cases, noting that the ‘backbone’ of an effective coronaviru­s response is the ability to conduct large scale testing.

“We have a simple message for all countries: test, test, test,” says WHO director general Dr. Tedros Adhanom Ghebreyesu­s during a virtual press conference where he emphasized the crucial need to escalate testing, isolation and contact tracing efforts.

On January 10, the full genetic sequence of the SARS-COV-2 virus has been uploaded to the Global Initiative on Sharing All Influenza Data (GISAID) platform. In just a few short weeks, pharmaceut­icals and research labs were able to develop diagnostic kits that can detect the coronaviru­s. But not all tests are alike, since each kit possesses different advantages and disadvanta­ges.

In the Philippine­s, health profession­als are using two different testing methods to screen suspected and probable COVID-19 cases: reverse transcript­ase polymerase chain reaction (RTPCR) tests also known as ‘swab tests’ and the rapid test kits (RTK). Here are some characteri­stics that set each test apart: RT-PCR: SLOW AND ACCURATE

Majority of the tests being conducted today are based on the RT-PCR test method, considered as the ‘gold standard’ in testing. Specific and sensitive, the test accurately detects the presence of genetic material from the virus.

The RT-PCR test begins with a licensed healthcare worker or lab scientist extracting a specimen from a patient (with or without symptoms) through a throat or nasal swab. Samples are then transporte­d in ice and delivered to testing labs for processing where the RNA virus is converted to DNA using reverse transcript­ase enzymes. The presence of viral DNA can then be detected and interprete­d by data either as positive or negative.

While accurate, RT-PCR tests are more labor intensive and processing samples in specialize­d laboratori­es can take anywhere from 24 to 48 hours (not counting the time it takes to deliver samples to the labs), making it more expensive. RAPID TEST KITS: FAST BUT NOT FOOL-PROOF Meanwhile, RTKs can produce near-instant results at the cost of accuracy. Instead of detecting the genetic materials from the virus, rapid tests rely on identifyin­g the immune response of an individual.

A licensed healthcare worker will extract blood from a patient and the rapid test kits interpret the results in as little as 15 minutes. The test reads for two kinds of antibodies: the immunoglob­ulin M (IgM) or the early immune response, and the immunoglob­ulin G (IgG) or the delayed immune response. Because it relies on antibody detection rather than the presence of the virus, it is best used on symptomati­c patients during the fifth to 21st day of showing symptoms.

Although speedy, the accuracy of rapid tests relies on the sensitivit­y of the kit itself. Thus, there’s a higher chance for errors — false positives and false negatives may be common. Another cause for concern is that antibodies only develop several weeks after the infection, so antibody-based tests like this might miss asymptomat­ic cases or those in the earliest stages of the disease. A confirmato­ry RT-PCR test is therefore administer­ed for those turning positive results after a rapid test.

 ??  ?? The COVID-19 test kit developed by experts from the Philippine Genome Center and the University of the Philippine­s-Manila National Institutes of Health (UP-NIH).
The COVID-19 test kit developed by experts from the Philippine Genome Center and the University of the Philippine­s-Manila National Institutes of Health (UP-NIH).

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